USC-OGP 2-DE database Two-dimensional polyacrylamide gel electrophoresis database

USC-OGP 2-DE database  Search by                Maps             Select Remote Interfaces [All Interfaces] SWISS-2DPAGE World-2DPAGE Portal World-2DPAGE Repository Exclude local DBs has only effect if a remote interface is selected

Searching in 'USC-OGP 2-DE database' for entry matching: P48444 USC-OGP 2-DE database:  P48444 P48444 General information about the entry View entry in simple text format Entry name COPD_HUMAN Primary accession number P48444 integrated into USC-OGP 2-DE database on  January 17, 2017 (release 1) 2D Annotations were last modified on January 17, 2017 (version 1) General Annotations were last modified on  April 5, 2017 (version 2) Name and origin of the protein Description RecName: Full=Coatomer subunit delta; AltName: Full=Archain; AltName: Full=Delta-coat protein; Short=Delta-COP;. Gene name Name=ARCN1 Synonyms=COPD Annotated species Homo sapiens (Human) [TaxID: 9606] Taxonomy Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. References [1]   2D GEL CHARACTERIZATION Author 1., Author 2. Submitted (Mar-2011) to Current 2D PAGE maps for identified proteins How to interpret a protein PLATELET_5-6 {PLATELET 5-6} Homo sapiens (Human)   map experimental info   PLATELET_5-6 MAP LOCATIONS: SPOT OGP-0750: pI=5.08; Mw=33627 UVEAL_MELANOMA_3-10 {UVEAL MELANOMA 3-10} Homo sapiens (Human)   map experimental info   UVEAL_MELANOMA_3-10 MAP LOCATIONS: SPOT OGP-1131: pI=6.28; Mw=65495 Cross-references UniProtKB/Swiss-Prot P48444; COPD_HUMAN. 2D PAGE maps for identified proteins How to interpret a protein map You may obtain an estimated location of the protein on various 2D PAGE maps, provided the whole amino acid sequence is known. The estimation is obtained according to the computed protein's pI and Mw. Warning 1: the displayed region reflects an area around the theoretical pI and molecular weight of the protein and is only provided for the user's information. It should be used with caution, as the experimental and theoretical positions of a protein may differ significantly. Warning 2: the 2D PAGE map is built on demand. This may take some few seconds to be computed. External data extracted from UniProtKB/Swiss-Prot Extracted from UniProtKB/Swiss-Prot, release: 0.0 Entry name COPD_HUMAN Primary accession number P48444 Secondary accession number(s) B4E1X2 E9PEU4 Q52M80 Sequence was last modified on  February 1, 1996 (version 1) Annotations were last modified on  March 15, 2017 (version 148) Name and origin of the protein Description RecName: Full=Coatomer subunit delta; AltName: Full=Archain; AltName: Full=Delta-coat protein; Short=Delta-COP; Gene name Name=ARCN1 Synonyms=COPD Encoded on Name=ARCN1; Synonyms=COPD Keywords Acetylation; Alternative splicing; Complete proteome; Cytoplasm; Cytoplasmic vesicle; Dwarfism; ER-Golgi transport; Golgi apparatus; Membrane; Phosphoprotein; Polymorphism; Protein transport; Reference proteome; Transport. Copyright Copyrighted by the UniProt Consortium, see http://www.uniprot.org/help/license. Distributed under the Creative Commons Attribution-NoDerivs License Cross-references EMBL X81197; CAA57071.1; -; mRNA EMBL X81198; CAA57072.1; ALT_INIT; mRNA EMBL AK304019; BAG64934.1; -; mRNA EMBL AP000941; -; NOT_ANNOTATED_CDS; Genomic_DNA EMBL BC093636; AAH93636.1; -; mRNA EMBL BC093638; AAH93638.1; -; mRNA CCDS CCDS44749.1; -. [P48444-2]; . CCDS CCDS8400.1; -. [P48444-1]; . PIR A56750; A56750; . RefSeq NP_001135753.1; NM_001142281.1. [P48444-2]; . RefSeq NP_001646.2; NM_001655.4. [P48444-1]; . UniGene Hs.33642; -; . ProteinModelPortal P48444; -; . BioGrid 106867; 39; . DIP DIP-50375N; -; . IntAct P48444; 27; . MINT MINT-3016718; -; . STRING 9606.ENSP00000264028; -; . iPTMnet P48444; -; . PhosphoSitePlus P48444; -; . SwissPalm P48444; -; . BioMuta ARCN1; -; . DMDM 1351970; -; . OGP P48444; -; . EPD P48444; -; . MaxQB P48444; -; . PaxDb P48444; -; . PeptideAtlas P48444; -; . PRIDE P48444; -; . Ensembl ENST00000264028; ENSP00000264028; ENSG00000095139. [P48444-1]; . Ensembl ENST00000392859; ENSP00000376599; ENSG00000095139. [P48444-2]; . GeneID 372; -; . KEGG hsa:372; -; . UCSC uc001ptq.4; human. [P48444-1]; . CTD 372; -; . DisGeNET 372; -; . GeneCards ARCN1; -; . HGNC HGNC:649; ARCN1; . HPA HPA037573; -; . HPA HPA044874; -; . MIM 600820; gene; . MIM 617164; phenotype; . neXtProt NX_P48444; -; . OpenTargets ENSG00000095139; -; . PharmGKB PA24931; -; . eggNOG KOG2635; Eukaryota; . eggNOG ENOG410XRH2; LUCA; . GeneTree ENSGT00390000017207; -; . HOGENOM HOG000203984; -; . HOVERGEN HBG005381; -; . InParanoid P48444; -; . KO K20471; -; . PhylomeDB P48444; -; . TreeFam TF105760; -; . Reactome R-HSA-6807878; COPI-mediated anterograde transport; . Reactome R-HSA-6811434; COPI-dependent Golgi-to-ER retrograde traffic; . SignaLink P48444; -; . ChiTaRS ARCN1; human; . GenomeRNAi 372; -; . PRO PR:P48444; -; . Proteomes UP000005640; Chromosome 11; . Bgee ENSG00000095139; -; . CleanEx HS_ARCN1; -; . ExpressionAtlas P48444; baseline and differential; . Genevisible P48444; HS; . GO GO:0030126; C:COPI vesicle coat; ISS:UniProtKB; . GO GO:0005829; C:cytosol; TAS:Reactome; . GO GO:0005789; C:endoplasmic reticulum membrane; TAS:Reactome; . GO GO:0000139; C:Golgi membrane; TAS:Reactome; . GO GO:0016020; C:membrane; IDA:UniProtKB; . GO GO:0030133; C:transport vesicle; TAS:Reactome; . GO GO:0003723; F:RNA binding; IDA:UniProtKB; . GO GO:0008344; P:adult locomotory behavior; IEA:Ensembl; . GO GO:0021691; P:cerebellar Purkinje cell layer maturation; IEA:Ensembl; . GO GO:0006888; P:ER to Golgi vesicle-mediated transport; TAS:Reactome; . GO GO:0006886; P:intracellular protein transport; TAS:ProtInc; . GO GO:0043473; P:pigmentation; IEA:Ensembl; . GO GO:0006890; P:retrograde vesicle-mediated transport; Golgi to ER; TAS:Reactome InterPro IPR022775; AP_mu_sigma_su; . InterPro IPR027059; Coatomer_dsu; . InterPro IPR011012; Longin-like_dom; . InterPro IPR028565; MHD; . PANTHER PTHR10121; PTHR10121; 1; . Pfam PF00928; Adap_comp_sub; 1; . Pfam PF01217; Clat_adaptor_s; 1; . SUPFAM SSF49447; SSF49447; 1; . SUPFAM SSF64356; SSF64356; 1; . PROSITE PS51072; MHD; 1; .

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